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central proteomics facilities pipeline (cpfp)  (SourceForge net)

 
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    SourceForge net central proteomics facilities pipeline (cpfp)
    <t>Proteomics</t> elucidates function and mechanism in molecular endocrinology. The schematic shows events on which proteomics reports in general functional models of G protein-coupled receptor and NR signaling. The binding of a variety of peptide ligands to G protein-coupled receptors (GPCR) induces recruitment of intracellular interacting partner proteins, touching off a variety of kinase cascades with functional endpoints in the cytoplasm (phosphorylated target protein) and nucleus. Nuclear targets of kinase cascades include transcription factors (TF), NR, and coregulators (CoR), which collectively modulate target gene expression and de novo protein synthesis. NR ligands bind directly to NR (the classic genomic model), inducing the recruitment of coregulators and modulating expression of target genes. Certain NR ligands have also been reported to elicit rapid cellular effects via cross talk with cellular kinase cascades (the nongenomic model). Phosphorylation events upon which phosphoproteomics reports are indicated.
    Central Proteomics Facilities Pipeline (Cpfp), supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/central proteomics facilities pipeline (cpfp)/product/SourceForge net
    Average 90 stars, based on 1 article reviews
    central proteomics facilities pipeline (cpfp) - by Bioz Stars, 2026-05
    90/100 stars

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    1) Product Images from "Minireview: Progress and Challenges in Proteomics Data Management, Sharing, and Integration"

    Article Title: Minireview: Progress and Challenges in Proteomics Data Management, Sharing, and Integration

    Journal: Molecular Endocrinology

    doi: 10.1210/me.2012-1180

    Proteomics elucidates function and mechanism in molecular endocrinology. The schematic shows events on which proteomics reports in general functional models of G protein-coupled receptor and NR signaling. The binding of a variety of peptide ligands to G protein-coupled receptors (GPCR) induces recruitment of intracellular interacting partner proteins, touching off a variety of kinase cascades with functional endpoints in the cytoplasm (phosphorylated target protein) and nucleus. Nuclear targets of kinase cascades include transcription factors (TF), NR, and coregulators (CoR), which collectively modulate target gene expression and de novo protein synthesis. NR ligands bind directly to NR (the classic genomic model), inducing the recruitment of coregulators and modulating expression of target genes. Certain NR ligands have also been reported to elicit rapid cellular effects via cross talk with cellular kinase cascades (the nongenomic model). Phosphorylation events upon which phosphoproteomics reports are indicated.
    Figure Legend Snippet: Proteomics elucidates function and mechanism in molecular endocrinology. The schematic shows events on which proteomics reports in general functional models of G protein-coupled receptor and NR signaling. The binding of a variety of peptide ligands to G protein-coupled receptors (GPCR) induces recruitment of intracellular interacting partner proteins, touching off a variety of kinase cascades with functional endpoints in the cytoplasm (phosphorylated target protein) and nucleus. Nuclear targets of kinase cascades include transcription factors (TF), NR, and coregulators (CoR), which collectively modulate target gene expression and de novo protein synthesis. NR ligands bind directly to NR (the classic genomic model), inducing the recruitment of coregulators and modulating expression of target genes. Certain NR ligands have also been reported to elicit rapid cellular effects via cross talk with cellular kinase cascades (the nongenomic model). Phosphorylation events upon which phosphoproteomics reports are indicated.

    Techniques Used: Functional Assay, Binding Assay, Targeted Gene Expression, Expressing, Phospho-proteomics

    Selected MS data analysis pipeline suites
    Figure Legend Snippet: Selected MS data analysis pipeline suites

    Techniques Used: Labeling, Quantitation Assay, Multiplex sample analysis, Phospho-proteomics, Biomarker Discovery



    Similar Products

    central proteomics facilities pipeline (cpfp)  (SourceForge net)
    90
    SourceForge net central proteomics facilities pipeline (cpfp)
    <t>Proteomics</t> elucidates function and mechanism in molecular endocrinology. The schematic shows events on which proteomics reports in general functional models of G protein-coupled receptor and NR signaling. The binding of a variety of peptide ligands to G protein-coupled receptors (GPCR) induces recruitment of intracellular interacting partner proteins, touching off a variety of kinase cascades with functional endpoints in the cytoplasm (phosphorylated target protein) and nucleus. Nuclear targets of kinase cascades include transcription factors (TF), NR, and coregulators (CoR), which collectively modulate target gene expression and de novo protein synthesis. NR ligands bind directly to NR (the classic genomic model), inducing the recruitment of coregulators and modulating expression of target genes. Certain NR ligands have also been reported to elicit rapid cellular effects via cross talk with cellular kinase cascades (the nongenomic model). Phosphorylation events upon which phosphoproteomics reports are indicated.
    Central Proteomics Facilities Pipeline (Cpfp), supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/central proteomics facilities pipeline (cpfp)/product/SourceForge net
    Average 90 stars, based on 1 article reviews
    central proteomics facilities pipeline (cpfp) - by Bioz Stars, 2026-05
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Proteomics elucidates function and mechanism in molecular endocrinology. The schematic shows events on which proteomics reports in general functional models of G protein-coupled receptor and NR signaling. The binding of a variety of peptide ligands to G protein-coupled receptors (GPCR) induces recruitment of intracellular interacting partner proteins, touching off a variety of kinase cascades with functional endpoints in the cytoplasm (phosphorylated target protein) and nucleus. Nuclear targets of kinase cascades include transcription factors (TF), NR, and coregulators (CoR), which collectively modulate target gene expression and de novo protein synthesis. NR ligands bind directly to NR (the classic genomic model), inducing the recruitment of coregulators and modulating expression of target genes. Certain NR ligands have also been reported to elicit rapid cellular effects via cross talk with cellular kinase cascades (the nongenomic model). Phosphorylation events upon which phosphoproteomics reports are indicated.

    Journal: Molecular Endocrinology

    Article Title: Minireview: Progress and Challenges in Proteomics Data Management, Sharing, and Integration

    doi: 10.1210/me.2012-1180

    Figure Lengend Snippet: Proteomics elucidates function and mechanism in molecular endocrinology. The schematic shows events on which proteomics reports in general functional models of G protein-coupled receptor and NR signaling. The binding of a variety of peptide ligands to G protein-coupled receptors (GPCR) induces recruitment of intracellular interacting partner proteins, touching off a variety of kinase cascades with functional endpoints in the cytoplasm (phosphorylated target protein) and nucleus. Nuclear targets of kinase cascades include transcription factors (TF), NR, and coregulators (CoR), which collectively modulate target gene expression and de novo protein synthesis. NR ligands bind directly to NR (the classic genomic model), inducing the recruitment of coregulators and modulating expression of target genes. Certain NR ligands have also been reported to elicit rapid cellular effects via cross talk with cellular kinase cascades (the nongenomic model). Phosphorylation events upon which phosphoproteomics reports are indicated.

    Article Snippet: Name Description URL (Ref.) Central Proteomics Facilities Pipeline (CPFP) Suite for labeled or label-free quantitation in core proteomics facilities http://cpfp.sourceforge.net ( 124 ) LabKey Server Suite to identify and quantify proteins using its Computational Proteomics System (CPAS) and integrating with a variety of search engines and TPP components http://labkey.com ( 125 ) MaxQuant Suite for high-resolution labeled or label-free MS data with Andromeda search engine and a Viewer for visualization http://maxquant.org ( 68 ) Open Comprehensive Analysis Pipeline (OCAP) Suite for iTRAQ quantitative MS data analysis incorporating a variety of search engines and visualization components http://code.google.com/p/ocap ( 126 ) PhoMSVal Suite for MS/MS phosphopeptide data http://csbi.itdk.helsinki.fi/phomsval ( 127 ) The OpenMS Proteomic Pipeline (TOPP) Suite for creating custom analytic pipelines of HPLC/MS data http://open-ms.sourcefourge.net/topp/ ( 128 ) TPP (Trans-Proteomic Pipeline) Suite for validation, quantitation, and visualization of MS and MS/MS data, incorporating a variety of search engines http://sourceforge.net/projects/sashimi ( 129 ) with a guided tour ( 130 ) Open in a separate window Selected MS data analysis pipeline suites.

    Techniques: Functional Assay, Binding Assay, Targeted Gene Expression, Expressing, Phospho-proteomics

    Selected MS data analysis pipeline suites

    Journal: Molecular Endocrinology

    Article Title: Minireview: Progress and Challenges in Proteomics Data Management, Sharing, and Integration

    doi: 10.1210/me.2012-1180

    Figure Lengend Snippet: Selected MS data analysis pipeline suites

    Article Snippet: Name Description URL (Ref.) Central Proteomics Facilities Pipeline (CPFP) Suite for labeled or label-free quantitation in core proteomics facilities http://cpfp.sourceforge.net ( 124 ) LabKey Server Suite to identify and quantify proteins using its Computational Proteomics System (CPAS) and integrating with a variety of search engines and TPP components http://labkey.com ( 125 ) MaxQuant Suite for high-resolution labeled or label-free MS data with Andromeda search engine and a Viewer for visualization http://maxquant.org ( 68 ) Open Comprehensive Analysis Pipeline (OCAP) Suite for iTRAQ quantitative MS data analysis incorporating a variety of search engines and visualization components http://code.google.com/p/ocap ( 126 ) PhoMSVal Suite for MS/MS phosphopeptide data http://csbi.itdk.helsinki.fi/phomsval ( 127 ) The OpenMS Proteomic Pipeline (TOPP) Suite for creating custom analytic pipelines of HPLC/MS data http://open-ms.sourcefourge.net/topp/ ( 128 ) TPP (Trans-Proteomic Pipeline) Suite for validation, quantitation, and visualization of MS and MS/MS data, incorporating a variety of search engines http://sourceforge.net/projects/sashimi ( 129 ) with a guided tour ( 130 ) Open in a separate window Selected MS data analysis pipeline suites.

    Techniques: Labeling, Quantitation Assay, Multiplex sample analysis, Phospho-proteomics, Biomarker Discovery